10x Genomics Single Cell Flow Cell Calculator

10x Genomics Single Cell Calculator



Calculator will help determine the correct flow cell selection to achieve necessary read depth on single cell projects.

The sequencing parameters and number of cycles required for the different single cell applications can be found on the core's 10x Genomic page.



Number of Samples            

Target Cell Count                

Targeted Reads Per Cell      

Total Reads Required      

                    Flow Cell Use Ratio*
NovaSeq S2 Flow Cell              
NovaSeq S4 Lane     
NovaSeq S4 Flow Cell      


Assumptions used in calculations: